If more than 50 genes/sequences are provided as input, then the associated running time can take some time. Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes. After processing you will be send an email with a link to the created phylogenetic tree.
The selection modi are exclusive: please choose either Gene selection or Species selection.
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";
$selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";
$num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 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'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 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'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 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'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ) $local_species = 'aag' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ) $local_species = 'aag' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 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'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 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'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 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'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 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'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 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'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 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'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ) $local_species = 'cbr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 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'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ) $local_species = 'cbr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 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'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 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'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 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'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 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'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 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'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 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'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 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'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 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'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 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'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 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'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 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'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 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'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 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'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 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'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 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'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 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'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ) $local_species = 'shi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ) $local_species = 'shi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 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'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 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'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 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'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 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'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 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'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 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'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 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'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ), 'gf_id' => 'HOM05D000509', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000509' ), 'data_identifier' => 'HOM05D000509', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000509', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16200' => 'bna', 'A02p14160' => 'bna', 'A03p45430' => 'bna', 'A03p55620' => 'bna', 'A04p01140' => 'bna', 'A05p24200' => 'bna', 'A07p11550' => 'bna', 'A07p16760' => 'bna', 'A07p32610' => 'bna', 'A07p37800' => 'bna', 'A08p34440' => 'bna', 'A09p10770' => 'bna', 'A09p32630' => 'bna', 'A09p38280' => 'bna', 'A09p43280' => 'bna', 'A09p53420' => 'bna', 'Aa31LG1G15740' => 'aar', 'Aa31LG1G27330' => 'aar', 'Aa31LG1G5390' => 'aar', 'Aa31LG4G9020' => 'aar', 'Aa31LG5G5170' => 'aar', 'Aa31LG6G8120' => 'aar', 'Aa31LG7G10870' => 'aar', 'Aa31LG8G13210' => 'aar', 'Aa31LG9G13340' => 'aar', 'Aa31sc1118G20' => 'aar', 'Aa31sc1120G10' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3279' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2309' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2735' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.720' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_369.189' => 'aag', 'Actinidia01618' => 'ach', 'Actinidia02564' => 'ach', 'Actinidia03070' => 'ach', 'Actinidia03801' => 'ach', 'Actinidia09649' => 'ach', 'Actinidia12029' => 'ach', 'Actinidia12704' => 'ach', 'Actinidia17879' => 'ach', 'Actinidia20713' => 'ach', 'Actinidia25570' => 'ach', 'Actinidia26184' => 'ach', 'Actinidia30644' => 'ach', 'Actinidia36469' => 'ach', 'Actinidia36726' => 'ach', 'Ah.01g017980' => 'amhyb', 'Ah.02g114870' => 'amhyb', 'Ah.02g130880' => 'amhyb', 'Ah.03g136120' => 'amhyb', 'Ah.03g136130' => 'amhyb', 'Ah.03g145240' => 'amhyb', 'Ah.03g147530' => 'amhyb', 'Ah.04g163760' => 'amhyb', 'Ah.07g202730' => 'amhyb', 'Ah.12g058480' => 'amhyb', 'Ah.12g064210' => 'amhyb', 'Ah.13g073500' => 'amhyb', 'AL1G20140' => 'aly', 'AL1G41420' => 'aly', 'AL1G48220' => 'aly', 'AL1G53560' => 'aly', 'AL2G25870' => 'aly', 'AL2G31200' => 'aly', 'AL3G47180' => 'aly', 'AL5G30350' => 'aly', 'AL5G43630' => 'aly', 'AL6G43710' => 'aly', 'AL7G28290' => 'aly', 'AL8G44130' => 'aly', 'Aqoxy2G02281' => 'aox', 'Aqoxy5G02607' => 'aox', 'Aqoxy5G03350' => 'aox', 'Aqoxy5G03359' => 'aox', 'Aqoxy6G02916' => 'aox', 'Aqoxy7G00306' => 'aox', 'arahy.Tifrunner.gnm1.ann1.E8SAKG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MJW1CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NYL5F5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XVK42B' => 'arhy', 'AT1G09610' => 'ath', 'AT1G27930' => 'ath', 'AT1G33800' => 'ath', 'AT1G67330' => 'ath', 'AT1G71690' => 'ath', 'AT2G15440' => 'ath', 'AT3G50220' => 'ath', 'AT3G61370' => 'ath', 'AT4G07940' => 'ath', 'AT4G09990' => 'ath', 'AT4G24910' => 'ath', 'AT5G67210' => 'ath', 'ATR0083G008' => 'atr', 'ATR0561G017' => 'atr', 'ATR0561G257' => 'atr', 'ATR0680G086' => 'atr', 'ATR0723G057' => 'atr', 'ATR0724G042' => 'atr', 'ATR1089G148' => 'atr', 'Atru.chr11.2330' => 'acertr', 'Atru.chr13.2415' => 'acertr', 'Atru.chr3.274' => 'acertr', 'Atru.chr3.275' => 'acertr', 'Atru.chr5.2610' => 'acertr', 'Atru.chr5.498' => 'acertr', 'Atru.chr6.1797' => 'acertr', 'Atru.chr6.2575' => 'acertr', 'Atru.chr6.457' => 'acertr', 'AUR62001076' => 'cqu', 'AUR62001921' => 'cqu', 'AUR62002394' => 'cqu', 'AUR62003519' => 'cqu', 'AUR62003888' => 'cqu', 'AUR62004883' => 'cqu', 'AUR62005624' => 'cqu', 'AUR62005625' => 'cqu', 'AUR62005626' => 'cqu', 'AUR62010264' => 'cqu', 'AUR62010479' => 'cqu', 'AUR62013245' => 'cqu', 'AUR62017831' => 'cqu', 'AUR62023795' => 'cqu', 'AUR62028922' => 'cqu', 'AUR62028923' => 'cqu', 'AUR62028924' => 'cqu', 'AUR62030414' => 'cqu', 'BcaB01g00632' => 'bca', 'BcaB02g09940' => 'bca', 'BcaB03g13307' => 'bca', 'BcaB03g13688' => 'bca', 'BcaB03g13966' => 'bca', 'BcaB03g15347' => 'bca', 'BcaB05g24265' => 'bca', 'BcaB07g33012' => 'bca', 'BcaB08g34304' => 'bca', 'BcaB08g34592' => 'bca', 'BcaC01g00673' => 'bca', 'BcaC01g03067' => 'bca', 'BcaC02g10220' => 'bca', 'BcaC03g14833' => 'bca', 'BcaC03g15286' => 'bca', 'BcaC04g23046' => 'bca', 'BcaC04g23203' => 'bca', 'BcaC05g26604' => 'bca', 'BcaC05g26784' => 'bca', 'BcaC06g32849' => 'bca', 'BcaC06g32851' => 'bca', 'BcaC06g34803' => 'bca', 'BcaC06g35323' => 'bca', 'BcaC07g38523' => 'bca', 'BcaC07g39482' => 'bca', 'BcaC07g40634' => 'bca', 'BcaC07g41071' => 'bca', 'BcaC08g43840' => 'bca', 'BcaC08g46590' => 'bca', 'BcaC09g52246' => 'bca', 'BcaNung06006' => 'bca', 'BcaNung06009' => 'bca', 'BolC1t01948H' => 'bol', 'BolC2t08436H' => 'bol', 'BolC2t08940H' => 'bol', 'BolC3t17928H' => 'bol', 'BolC4t24686H' => 'bol', 'BolC5t31372H' => 'bol', 'BolC5t32522H' => 'bol', 'BolC6t36366H' => 'bol', 'BolC6t38970H' => 'bol', 'BolC6t39619H' => 'bol', 'BolC7t42248H' => 'bol', 'BolC7t42969H' => 'bol', 'BolC7t42972H' => 'bol', 'BolC7t45876H' => 'bol', 'BolC8t50149H' => 'bol', 'BolC8t51205H' => 'bol', 'BolC9t54007H' => 'bol', 'BolC9t54162H' => 'bol', 'BolC9t54900H' => 'bol', 'BolC9t58924H' => 'bol', 'BraA01t01556Z' => 'bra', 'BraA02t06479Z' => 'bra', 'BraA03t13675Z' => 'bra', 'BraA03t14629Z' => 'bra', 'BraA04t15830Z' => 'bra', 'BraA05t21299Z' => 'bra', 'BraA07t28943Z' => 'bra', 'BraA07t29401Z' => 'bra', 'BraA07t30885Z' => 'bra', 'BraA07t31344Z' => 'bra', 'BraA08t35356Z' => 'bra', 'BraA09t36719Z' => 'bra', 'BraA09t38804Z' => 'bra', 'BraA09t39338Z' => 'bra', 'BraA09t39798Z' => 'bra', 'BraA09t40768Z' => 'bra', 'C01p17170' => 'bna', 'C01p20190' => 'bna', 'C02p28920' => 'bna', 'C03p56390' => 'bna', 'C03p82970' => 'bna', 'C04p31370' => 'bna', 'C05p07650' => 'bna', 'C05p26520' => 'bna', 'C06p12210' => 'bna', 'C06p38780' => 'bna', 'C06p45680' => 'bna', 'C07p17430' => 'bna', 'C07p24490' => 'bna', 'C07p53860' => 'bna', 'C08p13050' => 'bna', 'C08p25270' => 'bna', 'C08p36230' => 'bna', 'C09p11180' => 'bna', 'C09p12740' => 'bna', 'CAN.G100.11' => 'can', 'CAN.G1231.22' => 'can', 'CAN.G222.49' => 'can', 'CAN.G352.63' => 'can', 'CAN.G362.13' => 'can', 'CAN.G370.31' => 'can', 'CAN.G54.2' => 'can', 'CAN.G541.16' => 'can', 'CAN.G551.69' => 'can', 'CAN.G78.80' => 'can', 'CAN.G855.22' => 'can', 'CANSAT01G0849' => 'cansat', 'CANSAT01G2804' => 'cansat', 'CANSAT25G1362' => 'cansat', 'CANSAT25G1670' => 'cansat', 'CANSAT25G1743' => 'cansat', 'CANSAT25G2252' => 'cansat', 'CANSAT25G2562' => 'cansat', 'CANSAT56G2260' => 'cansat', 'CANSAT64G2423' => 'cansat', 'CARHR009590' => 'chi', 'CARHR027360' => 'chi', 'CARHR033200' => 'chi', 'CARHR059860' => 'chi', 'CARHR105790' => 'chi', 'CARHR159580' => 'chi', 'CARHR171710' => 'chi', 'CARHR232310' => 'chi', 'CARHR280420' => 'chi', 'CARHR291140' => 'chi', 'Carub.0001s0896' => 'cru', 'Carub.0001s2638' => 'cru', 'Carub.0001s3197' => 'cru', 'Carub.0002s1362' => 'cru', 'Carub.0002s1840' => 'cru', 'Carub.0003s2930' => 'cru', 'Carub.0005s1654' => 'cru', 'Carub.0005s2804' => 'cru', 'Carub.0006s2854' => 'cru', 'Carub.0007s1615' => 'cru', 'Carub.0008s2730' => 'cru', 'Ca_07920_v3' => 'car', 'Ca_16455_v3' => 'car', 'Ca_18024_v3' => 'car', 'Ca_22815_v3' => 'car', 'Ca_27523_v3' => 'car', 'Ca_27782_v3' => 'car', 'CBR_g10819' => 'cbr', 'CBR_g10824' => 'cbr', 'Cc01_g01950' => 'ccan', 'Cc01_g01960' => 'ccan', 'Cc02_g19080' => 'ccan', 'Cc02_g23370' => 'ccan', 'Cc02_g38030' => 'ccan', 'Cc05_g00650' => 'ccan', 'Cc07_g06260' => 'ccan', 'Cc10_g09220' => 'ccan', 'Cc10_g09230' => 'ccan', 'Cc11_g16960' => 'ccan', 'CDE04G2788' => 'cde', 'CDE05G1141' => 'cde', 'CDE07G0074' => 'cde', 'CDE07G0109' => 'cde', 'CDE09G0401' => 'cde', 'Cfa003925' => 'cfa', 'Cfa004468' => 'cfa', 'Cfa004552' => 'cfa', 'Cfa007224' => 'cfa', 'Cfa008112' => 'cfa', 'Cfa011752' => 'cfa', 'Cfa018792' => 'cfa', 'Ciclev10002026m.g' => 'ccl', 'Ciclev10018349m.g' => 'ccl', 'Ciclev10021249m.g' => 'ccl', 'Ciclev10022504m.g' => 'ccl', 'Ciclev10025796m.g' => 'ccl', 'Ciclev10028798m.g' => 'ccl', 'Ciclev10032331m.g' => 'ccl', 'Ciclev10033933m.g' => 'ccl', 'CiPaw.01G014600' => 'cil', 'CiPaw.01G061300' => 'cil', 'CiPaw.02G006900' => 'cil', 'CiPaw.02G030900' => 'cil', 'CiPaw.03G017100' => 'cil', 'CiPaw.03G055900' => 'cil', 'CiPaw.04G011200' => 'cil', 'CiPaw.05G003200' => 'cil', 'CiPaw.05G009000' => 'cil', 'CiPaw.05G109100' => 'cil', 'CiPaw.06G103100' => 'cil', 'CiPaw.06G170900' => 'cil', 'CiPaw.06G175800' => 'cil', 'CiPaw.11G006700' => 'cil', 'CiPaw.12G043500' => 'cil', 'ClCG01G014500' => 'cla', 'ClCG01G016970' => 'cla', 'ClCG02G006160' => 'cla', 'ClCG03G003800' => 'cla', 'ClCG06G003680' => 'cla', 'ClCG11G008810' => 'cla', 'ClCG11G013610' => 'cla', 'COL.COLO4_11459' => 'col', 'COL.COLO4_17696' => 'col', 'COL.COLO4_20186' => 'col', 'COL.COLO4_20409' => 'col', 'COL.COLO4_24618' => 'col', 'COL.COLO4_28133' => 'col', 'COL.COLO4_32622' => 'col', 'Cpa.g.sc11.3' => 'cpa', 'Cpa.g.sc110.39' => 'cpa', 'Cpa.g.sc13.111' => 'cpa', 'Cpa.g.sc200.19' => 'cpa', 'Cpa.g.sc21.55' => 'cpa', 'Cpa.g.sc44.54' => 'cpa', 'Cpa.g.sc55.110' => 'cpa', 'Cpa.g.sc808.2' => 'cpa', 'CsaV3_1G007810' => 'csa', 'CsaV3_1G009680' => 'csa', 'CsaV3_2G033080' => 'csa', 'CsaV3_5G030230' => 'csa', 'CsaV3_6G000560' => 'csa', 'CsaV3_6G043440' => 'csa', 'CsaV3_7G008370' => 'csa', 'CSS0000798' => 'camsi', 'CSS0001062' => 'camsi', 'CSS0003830' => 'camsi', 'CSS0007215' => 'camsi', 'CSS0009941' => 'camsi', 'CSS0014005' => 'camsi', 'CSS0014656' => 'camsi', 'CSS0015390' => 'camsi', 'CSS0015828' => 'camsi', 'CSS0022847' => 'camsi', 'CSS0024643' => 'camsi', 'CSS0025890' => 'camsi', 'CSS0027927' => 'camsi', 'CSS0032185' => 'camsi', 'DCAR_001706' => 'dca', 'DCAR_007492' => 'dca', 'DCAR_010869' => 'dca', 'DCAR_011521' => 'dca', 'DCAR_015102' => 'dca', 'DCAR_015993' => 'dca', 'DCAR_019105' => 'dca', 'DCAR_022003' => 'dca', 'DCAR_022004' => 'dca', 'DCAR_024097' => 'dca', 'DCAR_026460' => 'dca', 'DCAR_031206' => 'dca', 'Dinv10952' => 'din', 'Dinv11178' => 'din', 'Dinv15743' => 'din', 'Dinv19429' => 'din', 'Dinv25657' => 'din', 'Dinv26851' => 'din', 'Dinv29611' => 'din', 'Dinv30020' => 'din', 'Dinv32484' => 'din', 'Dinv41795' => 'din', 'Dinv42176' => 'din', 'Duzib052G0518' => 'dzi', 'Duzib052G0968' => 'dzi', 'Duzib068G1474' => 'dzi', 'Duzib084G1301' => 'dzi', 'Duzib132G0597' => 'dzi', 'Duzib132G0725' => 'dzi', 'Duzib147G0449' => 'dzi', 'Duzib151G0093' => 'dzi', 'Duzib177G1168' => 'dzi', 'Duzib187G0050' => 'dzi', 'Duzib205G0578' => 'dzi', 'Duzib248G0190' => 'dzi', 'Duzib248G1023' => 'dzi', 'Duzib248G1201' => 'dzi', 'Duzib251G0371' => 'dzi', 'Duzib268G1622' => 'dzi', 'ECA232G4090' => 'eca', 'ECA232G4955' => 'eca', 'ECA233G2147' => 'eca', 'ECA233G2837' => 'eca', 'ECA234G1062' => 'eca', 'ECA246G0361' => 'eca', 'ECA246G1321' => 'eca', 'ECA246G4378' => 'eca', 'ECA247G2264' => 'eca', 'EL10Ac3g06087' => 'bvu', 'EL10Ac4g09051' => 'bvu', 'EL10Ac5g11408' => 'bvu', 'EL10Ac5g12582' => 'bvu', 'EL10Ac6g13508' => 'bvu', 'EL10Ac6g13510' => 'bvu', 'EL10Ac6g13511' => 'bvu', 'EL10Ac6g15735' => 'bvu', 'EL10Ac8g20190' => 'bvu', 'EL10Ac9g22314' => 'bvu', 'Eucgr.B00880' => 'egr', 'Eucgr.B00993' => 'egr', 'Eucgr.F02961' => 'egr', 'Eucgr.G01567' => 'egr', 'Eucgr.H01774' => 'egr', 'Eucgr.H02125' => 'egr', 'Eucgr.H02163' => 'egr', 'Eucgr.H02189' => 'egr', 'Eucgr.H02217' => 'egr', 'Eucgr.I00888' => 'egr', 'Eucgr.I01114' => 'egr', 'Eucgr.I01644' => 'egr', 'Eucgr.I02785' => 'egr', 'Eucgr.K02723' => 'egr', 'Eucgr.L01454' => 'egr', 'FAN01G0359' => 'fan', 'FAN03G2840' => 'fan', 'FAN04G0900' => 'fan', 'FAN04G1651' => 'fan', 'FAN04G2931' => 'fan', 'FAN06G1484' => 'fan', 'FAN06G3105' => 'fan', 'FAN07G2392' => 'fan', 'FAN07G2782' => 'fan', 'FAN08G0471' => 'fan', 'FAN08G3451' => 'fan', 'FAN10G1528' => 'fan', 'FAN10G1645' => 'fan', 'FAN11G0284' => 'fan', 'FAN12G0171' => 'fan', 'FAN12G1663' => 'fan', 'FAN15G2859' => 'fan', 'FAN17G0631' => 'fan', 'FAN17G0736' => 'fan', 'FAN18G3036' => 'fan', 'FAN18G3071' => 'fan', 'FAN18G4592' => 'fan', 'FAN19G1275' => 'fan', 'FAN19G2402' => 'fan', 'FAN20G0452' => 'fan', 'FAN21G1662' => 'fan', 'FAN22G2015' => 'fan', 'FAN23G2826' => 'fan', 'FAN24G2367' => 'fan', 'FAN25G2703' => 'fan', 'FAN26G1300' => 'fan', 'FAN28G2915' => 'fan', 'FvH4_1g16440' => 'fve', 'FvH4_2g05560' => 'fve', 'FvH4_3g25190' => 'fve', 'FvH4_4g23680' => 'fve', 'FvH4_4g23700' => 'fve', 'FvH4_5g08380' => 'fve', 'FvH4_5g28110' => 'fve', 'FvH4_5g32940' => 'fve', 'FvH4_7g14280' => 'fve', 'Glyma.01G189000' => 'gma', 'Glyma.02G105400' => 'gma', 'Glyma.04G195900' => 'gma', 'Glyma.04G255800' => 'gma', 'Glyma.05G048600' => 'gma', 'Glyma.05G085700' => 'gma', 'Glyma.05G147600' => 'gma', 'Glyma.06G169900' => 'gma', 'Glyma.07G215600' => 'gma', 'Glyma.08G104600' => 'gma', 'Glyma.09G259300' => 'gma', 'Glyma.11G053200' => 'gma', 'Glyma.11G251000' => 'gma', 'Glyma.16G001600' => 'gma', 'Glyma.16G056100' => 'gma', 'Glyma.17G130500' => 'gma', 'Glyma.17G169200' => 'gma', 'Glyma.18G006000' => 'gma', 'Glyma.18G233000' => 'gma', 'Glyma.19G091600' => 'gma', 'Gohir.A01G160400' => 'ghi', 'Gohir.A02G020500' => 'ghi', 'Gohir.A03G052900' => 'ghi', 'Gohir.A03G125800' => 'ghi', 'Gohir.A03G187500' => 'ghi', 'Gohir.A04G139900' => 'ghi', 'Gohir.A05G276000' => 'ghi', 'Gohir.A07G051000' => 'ghi', 'Gohir.A08G013720' => 'ghi', 'Gohir.A09G247100' => 'ghi', 'Gohir.A11G047100' => 'ghi', 'Gohir.A11G196000' => 'ghi', 'Gohir.A12G073300' => 'ghi', 'Gohir.A12G149000' => 'ghi', 'Gohir.A13G118500' => 'ghi', 'Gohir.D02G024500' => 'ghi', 'Gohir.D02G148800' => 'ghi', 'Gohir.D02G208300' => 'ghi', 'Gohir.D03G114200' => 'ghi', 'Gohir.D04G183100' => 'ghi', 'Gohir.D05G278000' => 'ghi', 'Gohir.D09G247700' => 'ghi', 'Gohir.D11G050700' => 'ghi', 'Gohir.D11G202000' => 'ghi', 'Gohir.D12G071000' => 'ghi', 'Gohir.D12G152900' => 'ghi', 'Gohir.D13G122300' => 'ghi', 'Gorai.001G058700' => 'gra', 'Gorai.002G163200' => 'gra', 'Gorai.002G183200' => 'gra', 'Gorai.003G120500' => 'gra', 'Gorai.005G030400' => 'gra', 'Gorai.005G166800' => 'gra', 'Gorai.005G236300' => 'gra', 'Gorai.006G272100' => 'gra', 'Gorai.007G055100' => 'gra', 'Gorai.007G216600' => 'gra', 'Gorai.008G078100' => 'gra', 'Gorai.008G165400' => 'gra', 'Gorai.009G291300' => 'gra', 'Gorai.012G176100' => 'gra', 'Gorai.013G137000' => 'gra', 'GSVIVG01003391001' => 'vvi', 'GSVIVG01004862001' => 'vvi', 'GSVIVG01004864001' => 'vvi', 'GSVIVG01008341001' => 'vvi', 'GSVIVG01010491001' => 'vvi', 'GSVIVG01023202001' => 'vvi', 'GSVIVG01023221001' => 'vvi', 'HanXRQChr03g0068061' => 'han', 'HanXRQChr03g0070121' => 'han', 'HanXRQChr04g0102691' => 'han', 'HanXRQChr05g0155181' => 'han', 'HanXRQChr06g0174661' => 'han', 'HanXRQChr08g0207861' => 'han', 'HanXRQChr09g0249041' => 'han', 'HanXRQChr09g0257651' => 'han', 'HanXRQChr09g0273261' => 'han', 'HanXRQChr11g0328301' => 'han', 'HanXRQChr11g0348451' => 'han', 'HanXRQChr14g0450791' => 'han', 'HanXRQChr17g0540221' => 'han', 'Haze_07142' => 'cav', 'Haze_10025' => 'cav', 'Haze_10124' => 'cav', 'Haze_12424' => 'cav', 'Haze_13926' => 'cav', 'Haze_14880' => 'cav', 'Haze_15369' => 'cav', 'Haze_15506' => 'cav', 'Hma1.2p1_0014F.1_g009380' => 'hma', 'Hma1.2p1_0065F.1_g035420' => 'hma', 'Hma1.2p1_0471F.1_g159560' => 'hma', 'Hma1.2p1_0474F.1_g160600' => 'hma', 'Hma1.2p1_0796F.1_g218980' => 'hma', 'Hma1.2p1_0884F.1_g232340' => 'hma', 'Hma1.2p1_1057F.1_g252830' => 'hma', 'HPP92_008060' => 'vpl', 'HPP92_009205' => 'vpl', 'HPP92_009723' => 'vpl', 'HPP92_010364' => 'vpl', 'HPP92_020794' => 'vpl', 'Hund10139' => 'sun', 'Hund14272' => 'sun', 'Hund14886' => 'sun', 'Lalb_Chr03g0038131' => 'lal', 'Lalb_Chr04g0256621' => 'lal', 'Lalb_Chr04g0260441' => 'lal', 'Lalb_Chr05g0219361' => 'lal', 'Lalb_Chr05g0226221' => 'lal', 'Lalb_Chr07g0183471' => 'lal', 'Lalb_Chr07g0187121' => 'lal', 'Lalb_Chr14g0363451' => 'lal', 'Lalb_Chr15g0090811' => 'lal', 'Lalb_Chr16g0384891' => 'lal', 'Lalb_Chr16g0388781' => 'lal', 'Lalb_Chr23g0278111' => 'lal', 'Lj1g0009246' => 'lja', 'Lj1g0013999' => 'lja', 'Lj1g0015308' => 'lja', 'Lj2g0012317' => 'lja', 'Lj3g0003407' => 'lja', 'Lj3P1069T33' => 'lonja', 'Lj4C155T9' => 'lonja', 'Lj4g0000087' => 'lja', 'Lj4g0015586' => 'lja', 'Lj4g0020758' => 'lja', 'Lj5P212T20' => 'lonja', 'Lj5P270T59' => 'lonja', 'Lj6g0014378' => 'lja', 'Lj6g0015925' => 'lja', 'Lj6P827T26' => 'lonja', 'Lj7A610T66' => 'lonja', 'Lj7A74T40' => 'lonja', 'Lj7P411T19' => 'lonja', 'Lj9C701T18' => 'lonja', 'Lj9P297T19' => 'lonja', 'Lj9P479T29' => 'lonja', 'Lsat_1_v5_gn_1_25320' => 'lsa', 'Lsat_1_v5_gn_3_31020' => 'lsa', 'Lsat_1_v5_gn_3_90220' => 'lsa', 'Lsat_1_v5_gn_4_164481' => 'lsa', 'Lsat_1_v5_gn_4_3520' => 'lsa', 'Lsat_1_v5_gn_4_80860' => 'lsa', 'Lsat_1_v5_gn_5_12501' => 'lsa', 'Lsat_1_v5_gn_8_148061' => 'lsa', 'Lsat_1_v5_gn_9_110621' => 'lsa', 'Lsat_1_v5_gn_9_119580' => 'lsa', 'Manes.02G195600' => 'mes', 'Manes.06G119900' => 'mes', 'Manes.07G019100' => 'mes', 'Manes.07G026400' => 'mes', 'Manes.10G077800' => 'mes', 'Manes.10G115600' => 'mes', 'Manes.10G122200' => 'mes', 'Manes.12G010700' => 'mes', 'Manes.12G107200' => 'mes', 'Manes.13G011500' => 'mes', 'Manes.13G120000' => 'mes', 'Manes.15G161300' => 'mes', 'Manes.17G102900' => 'mes', 'Manes.18G121200' => 'mes', 'MBI03_g14515_MAGBIO' => 'mbi', 'MBI07_g21931_MAGBIO' => 'mbi', 'MBI07_g26871_MAGBIO' => 'mbi', 'MBI11_g05332_MAGBIO' => 'mbi', 'MBI16_g04097_MAGBIO' => 'mbi', 'MBI17_g24690_MAGBIO' => 'mbi', 'MBI17_g24691_MAGBIO' => 'mbi', 'MD01G1060700' => 'mdo', 'MD02G1177100' => 'mdo', 'MD03G1203200' => 'mdo', 'MD05G1091700' => 'mdo', 'MD06G1141300' => 'mdo', 'MD07G1137000' => 'mdo', 'MD08G1215400' => 'mdo', 'MD08G1244700' => 'mdo', 'MD13G1119900' => 'mdo', 'MD13G1120100' => 'mdo', 'MD14G1156500' => 'mdo', 'MD15G1287000' => 'mdo', 'MD15G1399700' => 'mdo', 'MD15G1439800' => 'mdo', 'MD16G1120000' => 'mdo', 'Medtr3g005710' => 'mtr', 'Medtr3g085270' => 'mtr', 'Medtr4g094895' => 'mtr', 'Medtr4g102900' => 'mtr', 'Medtr4g485560' => 'mtr', 'Medtr4g485570' => 'mtr', 'Medtr7g029100' => 'mtr', 'Medtr7g077710' => 'mtr', 'Medtr8g080660' => 'mtr', 'Medtr8g095630' => 'mtr', 'Medtr8g095650' => 'mtr', 'MELO3C002196.2' => 'cme', 'MELO3C002364.2' => 'cme', 'MELO3C007575.2' => 'cme', 'MELO3C008078.2' => 'cme', 'MELO3C011861.2' => 'cme', 'MELO3C018470.2' => 'cme', 'MELO3C021209.2' => 'cme', 'Migut.B00370' => 'egut', 'Migut.B01755' => 'egut', 'Migut.C01347' => 'egut', 'Migut.C01349' => 'egut', 'Migut.E00015' => 'egut', 'Migut.I00536' => 'egut', 'Migut.L00176' => 'egut', 'Migut.N00852' => 'egut', 'Migut.N01174' => 'egut', 'MSTRG.13308' => 'ama', 'MSTRG.15376' => 'ama', 'MSTRG.1579' => 'ama', 'MSTRG.16726' => 'ama', 'MSTRG.19818' => 'ama', 'MSTRG.20173' => 'ama', 'MSTRG.20833' => 'ama', 'MSTRG.22902' => 'ama', 'MSTRG.27738' => 'ama', 'MSTRG.27872' => 'ama', 'MSTRG.3438' => 'ama', 'MSTRG.5352' => 'ama', 'MSTRG.8007' => 'ama', 'Nitab4.5_0000413g0080' => 'nta', 'Nitab4.5_0000583g0080' => 'nta', 'Nitab4.5_0000604g0080' => 'nta', 'Nitab4.5_0000861g0010' => 'nta', 'Nitab4.5_0000929g0070' => 'nta', 'Nitab4.5_0001278g0080' => 'nta', 'Nitab4.5_0001359g0020' => 'nta', 'Nitab4.5_0001603g0030' => 'nta', 'Nitab4.5_0002003g0010' => 'nta', 'Nitab4.5_0005014g0040' => 'nta', 'Nitab4.5_0005252g0010' => 'nta', 'Nitab4.5_0006762g0030' => 'nta', 'Nitab4.5_0007402g0050' => 'nta', 'Nitab4.5_0007693g0030' => 'nta', 'Nitab4.5_0007693g0040' => 'nta', 'Nitab4.5_0009331g0010' => 'nta', 'Nitab4.5_0011188g0040' => 'nta', 'Nitab4.5_0014182g0010' => 'nta', 'Nitab4.5_0015444g0010' => 'nta', 'Nn2g13196' => 'nnu', 'Nn3g16453' => 'nnu', 'Nn4g22304' => 'nnu', 'Nn4g22307' => 'nnu', 'Nn5g26917' => 'nnu', 'Nn5g28819' => 'nnu', 'Nn5g30376' => 'nnu', 'Nn6g33420' => 'nnu', 'Oeu006609.1' => 'oeu', 'Oeu006610.1' => 'oeu', 'Oeu006611.1' => 'oeu', 'Oeu006612.1' => 'oeu', 'Oeu010388.1' => 'oeu', 'Oeu013234.1' => 'oeu', 'Oeu013733.1' => 'oeu', 'Oeu014806.1' => 'oeu', 'Oeu023490.1' => 'oeu', 'Oeu029195.1' => 'oeu', 'Oeu029197.1' => 'oeu', 'Oeu044255.1' => 'oeu', 'Oeu044296.1' => 'oeu', 'Oeu049138.1' => 'oeu', 'Os02g0158500' => 'osa', 'Os04g0649900' => 'osa', 'Os05g0447800' => 'osa', 'Os06g0687600' => 'osa', 'Os08g0559700' => 'osa', 'Os11g0242600' => 'osa', 'Os11g0488400' => 'osa', 'Os11g0490100' => 'osa', 'Os12g0204500' => 'osa', 'Peaxi162Scf00008g02117' => 'pax', 'Peaxi162Scf00011g01522' => 'pax', 'Peaxi162Scf00016g02216' => 'pax', 'Peaxi162Scf00020g00322' => 'pax', 'Peaxi162Scf00032g03114' => 'pax', 'Peaxi162Scf00089g00210' => 'pax', 'Peaxi162Scf00101g00013' => 'pax', 'Peaxi162Scf00128g01315' => 'pax', 'Peaxi162Scf00320g00052' => 'pax', 'Peaxi162Scf00549g00028' => 'pax', 'Peaxi162Scf00688g00011' => 'pax', 'Peaxi162Scf00961g00042' => 'pax', 'PGR004G0819' => 'pgr', 'PGR042G0097' => 'pgr', 'PGR042G1824' => 'pgr', 'PGR042G3203' => 'pgr', 'PGR044G0333' => 'pgr', 'PGR102G3086' => 'pgr', 'PGR142G0712' => 'pgr', 'PGR142G1399' => 'pgr', 'PGR142G2298' => 'pgr', 'PGSC0003DMG400000042' => 'stu', 'PGSC0003DMG400015302' => 'stu', 'PGSC0003DMG400024989' => 'stu', 'PGSC0003DMG400025474' => 'stu', 'PGSC0003DMG400025875' => 'stu', 'PGSC0003DMG400029953' => 'stu', 'PGSC0003DMG400031183' => 'stu', 'PGSC0003DMG400034315' => 'stu', 'PGSC0003DMG402024882' => 'stu', 'Phvul.001G093100' => 'pvu', 'Phvul.001G262300' => 'pvu', 'Phvul.002G016200' => 'pvu', 'Phvul.002G092400' => 'pvu', 'Phvul.003G211500' => 'pvu', 'Phvul.003G241300' => 'pvu', 'Phvul.005G001400' => 'pvu', 'Phvul.006G220400' => 'pvu', 'Phvul.008G062400' => 'pvu', 'Phvul.008G065500' => 'pvu', 'Phvul.L002346' => 'pvu', 'Potri.001G056300' => 'ptr', 'Potri.001G302600' => 'ptr', 'Potri.003G003801' => 'ptr', 'Potri.003G172300' => 'ptr', 'Potri.004G226800' => 'ptr', 'Potri.005G141300' => 'ptr', 'Potri.006G202400' => 'ptr', 'Potri.007G047000' => 'ptr', 'Potri.009G098800' => 'ptr', 'Potri.013G102200' => 'ptr', 'Potri.015G096900' => 'ptr', 'Potri.016G069200' => 'ptr', 'Potri.019G076300' => 'ptr', 'Pp3c16_5380' => 'ppa', 'Pp3c7_5630' => 'ppa', 'Prupe.1G174800' => 'ppe', 'Prupe.1G225200' => 'ppe', 'Prupe.1G547100' => 'ppe', 'Prupe.1G582100' => 'ppe', 'Prupe.2G170600' => 'ppe', 'Prupe.3G114300' => 'ppe', 'Prupe.5G150600' => 'ppe', 'Prupe.6G230900' => 'ppe', 'Prupe.7G074500' => 'ppe', 'Prupe.8G131100' => 'ppe', 'Psat1g004760' => 'psa', 'Psat3g108360' => 'psa', 'Psat3g178360' => 'psa', 'Psat4g066720' => 'psa', 'Psat4g085120' => 'psa', 'Psat5g096520' => 'psa', 'Psat7g077040' => 'psa', 'Psat7g128000' => 'psa', 'PSO017G1022' => 'pso', 'PSO017G4734' => 'pso', 'PSO017G7285' => 'pso', 'PSO063G2671' => 'pso', 'PSO170G1920' => 'pso', 'PSO170G6616' => 'pso', 'PSO339G4277' => 'pso', 'PSO478G1119' => 'pso', 'PSO478G3360' => 'pso', 'PSO478G3692' => 'pso', 'PSO541G3980' => 'pso', 'PSO675G0410' => 'pso', 'PSO675G9292' => 'pso', 'PSO732G0231' => 'pso', 'PSO782G0796' => 'pso', 'PSO782G3628' => 'pso', 'QL01p005382' => 'qlo', 'QL02p018426' => 'qlo', 'QL02p036597' => 'qlo', 'QL02p037107' => 'qlo', 'QL02p071272' => 'qlo', 'QL02p101838' => 'qlo', 'QL03p052567' => 'qlo', 'QL08p048801' => 'qlo', 'QL09p000346' => 'qlo', 'QL09p004069' => 'qlo', 'QL10p002866' => 'qlo', 'QL10p007195' => 'qlo', 'QL11p034530' => 'qlo', 'QL11p053603' => 'qlo', 'QL93p0259_0027' => 'qlo', 'RcHm_v2.0_Chr1g0355271' => 'rch', 'RcHm_v2.0_Chr2g0100661' => 'rch', 'RcHm_v2.0_Chr2g0106321' => 'rch', 'RcHm_v2.0_Chr4g0430171' => 'rch', 'RcHm_v2.0_Chr5g0046131' => 'rch', 'RcHm_v2.0_Chr6g0255871' => 'rch', 'RcHm_v2.0_Chr6g0271041' => 'rch', 'RcHm_v2.0_Chr7g0190071' => 'rch', 'RcHm_v2.0_Chr7g0230891' => 'rch', 'Rhsim05G0126200' => 'rsi', 'Rhsim07G0117300' => 'rsi', 'Rhsim07G0117600' => 'rsi', 'Rhsim07G0118400' => 'rsi', 'Rhsim08G0098600' => 'rsi', 'Rhsim08G0190400' => 'rsi', 'Rhsim10G0113500' => 'rsi', 'Rhsim12G0003900' => 'rsi', 'Rhsim12G0004000' => 'rsi', 'Rhsim12G0091600' => 'rsi', 'Rhsim12G0091800' => 'rsi', 'Sabra01G0040700' => 'sbr', 'Sabra01G0172200' => 'sbr', 'Sabra02G0116600' => 'sbr', 'Sabra03G0002100' => 'sbr', 'Sabra03G0126100' => 'sbr', 'Sabra05G0110100' => 'sbr', 'Sabra07G0041900' => 'sbr', 'Sabra09G0075400' => 'sbr', 'Sabra13G0088300' => 'sbr', 'Sabra15G0084500' => 'sbr', 'Sabra15G0117600' => 'sbr', 'Sabra16G0190400' => 'sbr', 'Sabra19G0086700' => 'sbr', 'SalBow1G4887' => 'sbo', 'SalBow2G2665' => 'sbo', 'SalBow3G2942' => 'sbo', 'SalBow5G4710' => 'sbo', 'SalBow5G5179' => 'sbo', 'SalBow6G0150' => 'sbo', 'SalBow6G4776' => 'sbo', 'SalBow7G0856' => 'sbo', 'Sc01g0006100' => 'sci', 'Sc03g0006540' => 'sci', 'Sc04g0010150' => 'sci', 'Sc04g0010160' => 'sci', 'Sc04g0010170' => 'sci', 'Sc07g0000700' => 'sci', 'Sc08g0001650' => 'sci', 'Sc09g0004100' => 'sci', 'Sc10g0010480' => 'sci', 'Sc16g0004660' => 'sci', 'Sed0001004' => 'sed', 'Sed0006455' => 'sed', 'Sed0007072' => 'sed', 'Sed0007615' => 'sed', 'Sed0011578' => 'sed', 'Sed0013670' => 'sed', 'Sed0017265' => 'sed', 'Sed0019413' => 'sed', 'Sed0024152' => 'sed', 'Sed0026491' => 'sed', 'SEGI_05341' => 'sgi', 'SEGI_24165' => 'sgi', 'SEGI_26189' => 'sgi', 'SEGI_35698' => 'sgi', 'SEGI_37850' => 'sgi', 'SEGI_38599' => 'sgi', 'SGA_v2.0_scaffold144G35939' => 'sas', 'SGA_v2.0_scaffold225G43095' => 'sas', 'SGA_v2.0_scaffold24G10620' => 'sas', 'SGA_v2.0_scaffold391G50629' => 'sas', 'SGA_v2.0_scaffold43G16451' => 'sas', 'SGA_v2.0_scaffold46G17439' => 'sas', 'SGA_v2.0_scaffold649G53355' => 'sas', 'SGA_v2.0_scaffold95G28834' => 'sas', 'SHI17970' => 'shi', 'SMO165G0046' => 'smo', 'SMO228G0073' => 'smo', 'Solyc01g094630.3' => 'sly', 'Solyc01g103360.4' => 'sly', 'Solyc01g107800.4' => 'sly', 'Solyc02g064945.1' => 'sly', 'Solyc02g093090.1' => 'sly', 'Solyc03g110890.1' => 'sly', 'Solyc05g015495.1' => 'sly', 'Solyc05g015497.1' => 'sly', 'Solyc06g064800.2' => 'sly', 'Solyc07g015920.3' => 'sly', 'Solyc11g020470.1' => 'sly', 'Solyc11g020540.1' => 'sly', 'Solyc11g031950.1' => 'sly', 'Sopen01g038440' => 'spe', 'Sopen01g045730' => 'spe', 'Sopen01g049970' => 'spe', 'Sopen02g015070' => 'spe', 'Sopen02g037660' => 'spe', 'Sopen03g030080' => 'spe', 'Sopen05g010830' => 'spe', 'Sopen05g010880' => 'spe', 'Sopen07g005750' => 'spe', 'Sopen11g014350' => 'spe', 'Sp1g08220' => 'spa', 'Sp1g24110' => 'spa', 'Sp1g29130' => 'spa', 'Sp2g29460' => 'spa', 'Sp3g28730' => 'spa', 'Sp5g02030' => 'spa', 'Sp5g11940' => 'spa', 'Sp5g22280' => 'spa', 'Sp5g26680' => 'spa', 'Sp6g07350' => 'spa', 'Sp7g22890' => 'spa', 'TAR371G0998' => 'tar', 'TAR376G0426' => 'tar', 'TAR381G0515' => 'tar', 'TAR622G0491' => 'tar', 'TAR629G2140' => 'tar', 'TAR629G2978' => 'tar', 'TAR636G2420' => 'tar', 'THA.LOC104798540' => 'tha', 'THA.LOC104807131' => 'tha', 'THA.LOC104807254' => 'tha', 'THA.LOC104813370' => 'tha', 'THA.LOC104815885' => 'tha', 'THA.LOC104816829' => 'tha', 'THA.LOC104819566' => 'tha', 'THA.LOC104820523' => 'tha', 'THA.LOC104820589' => 'tha', 'THA.LOC104821247' => 'tha', 'THA.LOC104825018' => 'tha', 'THA.LOC104827326' => 'tha', 'Thecc.01G061300' => 'tca', 'Thecc.02G014600' => 'tca', 'Thecc.02G104700' => 'tca', 'Thecc.02G207400' => 'tca', 'Thecc.03G129600' => 'tca', 'Thecc.04G199400' => 'tca', 'Thecc.08G172700' => 'tca', 'Thhalv10004623m.g' => 'esa', 'Thhalv10006311m.g' => 'esa', 'Thhalv10008341m.g' => 'esa', 'Thhalv10009538m.g' => 'esa', 'Thhalv10010026m.g' => 'esa', 'Thhalv10010543m.g' => 'esa', 'Thhalv10018905m.g' => 'esa', 'Thhalv10018938m.g' => 'esa', 'Thhalv10022776m.g' => 'esa', 'Thhalv10027469m.g' => 'esa', 'Thhalv10028858m.g' => 'esa', 'TPR.G12639' => 'tpr', 'TPR.G14539' => 'tpr', 'TPR.G14590' => 'tpr', 'TPR.G17093' => 'tpr', 'TPR.G17785' => 'tpr', 'TPR.G19205' => 'tpr', 'TPR.G37720' => 'tpr', 'TPR.G38265' => 'tpr', 'TPR.G39559' => 'tpr', 'TWI09G1421' => 'twi', 'TWI14G0500' => 'twi', 'TWI14G0650' => 'twi', 'TWI14G1138' => 'twi', 'TWI18G0675' => 'twi', 'TWI23G0404' => 'twi', 'TWI23G0635' => 'twi', 'TWI39G0031' => 'twi', 'TWI60G0284' => 'twi', 'TWI73G0680' => 'twi', 'TWI75G0600' => 'twi', 'TWI75G1015' => 'twi', 'TWI79G0602' => 'twi', 'unitig_0.g1262' => 'ugi', 'unitig_0.g865' => 'ugi', 'unitig_0.g866' => 'ugi', 'unitig_21.g20880' => 'ugi', 'unitig_27.g25092' => 'ugi', 'unitig_32.g10770' => 'ugi', 'unitig_578.g16123' => 'ugi', 'unitig_61.g26014' => 'ugi', 'unitig_744.g24301' => 'ugi', 'vmacro00927' => 'vma', 'vmacro05262' => 'vma', 'vmacro19207' => 'vma', 'vmacro19847' => 'vma', 'vmacro20943' => 'vma', 'VMungo0251G0254' => 'vmu', 'VMungo0251G0357' => 'vmu', 'VMungo0251G1845' => 'vmu', 'VMungo0540G0837' => 'vmu', 'VMungo0540G1288' => 'vmu', 'VMungo1080G1488' => 'vmu', 'VMungo1127G1543' => 'vmu', 'VMungo1215G2302' => 'vmu', 'VMungo1215G2677' => 'vmu', 'VMungo1215G3250' => 'vmu', 'VMungo1383G0001' => 'vmu', 'VMungo1383G0114' => 'vmu', 'VMungo1383G3415' => 'vmu', 'Zm00001eb039300' => 'zma', 'Zm00001eb065560' => 'zma', 'Zm00001eb068410' => 'zma', 'Zm00001eb068420' => 'zma', 'Zm00001eb079090' => 'zma', 'Zm00001eb093180' => 'zma', 'Zm00001eb112280' => 'zma', 'Zm00001eb112820' => 'zma', 'Zm00001eb138390' => 'zma', 'Zm00001eb225830' => 'zma', 'Zm00001eb232590' => 'zma', 'Zm00001eb411100' => 'zma' ) $gf_id = 'HOM05D000509' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000509' ) $data_identifier = 'HOM05D000509' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 11, 'aag' => (int) 5, 'ach' => (int) 14, 'amhyb' => (int) 12, 'aly' => (int) 12, 'aox' => (int) 6, 'arhy' => (int) 4, 'ath' => (int) 12, 'atr' => (int) 7, 'acertr' => (int) 9, 'cqu' => (int) 18, 'bca' => (int) 32, 'bol' => (int) 20, 'bra' => (int) 16, 'can' => (int) 11, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 11, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 10, 'cde' => (int) 5, 'cfa' => (int) 7, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 7, 'camsi' => (int) 14, 'dca' => (int) 12, 'din' => (int) 11, 'dzi' => (int) 16, 'eca' => (int) 9, 'bvu' => (int) 10, 'egr' => (int) 15, 'fan' => (int) 32, 'fve' => (int) 9, 'gma' => (int) 20, 'ghi' => (int) 27, 'gra' => (int) 15, 'vvi' => (int) 7, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 5, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 14, 'mbi' => (int) 7, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 14, 'osa' => (int) 9, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 9, 'pvu' => (int) 11, 'ptr' => (int) 13, 'ppa' => (int) 2, 'ppe' => (int) 10, 'psa' => (int) 8, 'pso' => (int) 16, 'qlo' => (int) 15, 'rch' => (int) 9, 'rsi' => (int) 11, 'sbr' => (int) 13, 'sbo' => (int) 8, 'sci' => (int) 10, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 1, 'smo' => (int) 2, 'sly' => (int) 13, 'spe' => (int) 10, 'spa' => (int) 11, 'tar' => (int) 7, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 11, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 9, 'vma' => (int) 5, 'vmu' => (int) 13, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb411100' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1